PT-2026-55140 · Pypi · Open Babel

Published

2026-07-01

·

Updated

2026-07-01

CVSS v3.1

4.4

Medium

VectorAV:L/AC:L/PR:N/UI:R/S:U/C:L/I:N/A:L

Summary

A memory-safety vulnerability in Open Babel's PQS parser caused an out-of-bounds (pre-buffer) read when reading a crafted input file.

Details

The flaw was in the lowerit helper used by the PQS parser. A malformed input caused the helper to read one or more bytes before the start of its input buffer.

Impact

Open Babel is a C++ library and CLI used to read and write chemistry file formats; it is shipped by Linux distributions and embedded in services that may parse untrusted input. Triggering this vulnerability requires the victim to open a malicious PQS file with the obabel tool, the OBConversion API, or any of the language bindings (Python, Ruby, Java, R, Perl, C#, PHP).

Affected versions

All releases up to and including 3.1.1.

Patched version

3.2.0 (released 2026-05-26).

Patch

Fix commit: https://github.com/openbabel/openbabel/commit/f4a5ebae Fixes consolidated in #2913.
A minimized reproducer for this CVE is checked in under test/files/fuzz regress/ and is exercised on every CI build under ASAN+UBSAN by the fuzzregresstest harness.

Credit

Reported via OSS-Fuzz.

Exploit

Fix

Improper Resource Release

Out of bounds Read

Found an issue in the description? Have something to add? Feel free to write us 👾

Weakness Enumeration

Related Identifiers

GHSA-M982-7Q3H-R784

Affected Products

Open Babel